The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in tackling the research questions posed. To shed light on the status quo of algorithm development in the specific field of biomedical imaging analysis, we designed an international survey that was issued to all participants of challenges conducted in conjunction with the IEEE ISBI 2021 and MICCAI 2021 conferences (80 competitions in total). The survey covered participants' expertise and working environments, their chosen strategies, as well as algorithm characteristics. A median of 72% challenge participants took part in the survey. According to our results, knowledge exchange was the primary incentive (70%) for participation, while the reception of prize money played only a minor role (16%). While a median of 80 working hours was spent on method development, a large portion of participants stated that they did not have enough time for method development (32%). 25% perceived the infrastructure to be a bottleneck. Overall, 94% of all solutions were deep learning-based. Of these, 84% were based on standard architectures. 43% of the respondents reported that the data samples (e.g., images) were too large to be processed at once. This was most commonly addressed by patch-based training (69%), downsampling (37%), and solving 3D analysis tasks as a series of 2D tasks. K-fold cross-validation on the training set was performed by only 37% of the participants and only 50% of the participants performed ensembling based on multiple identical models (61%) or heterogeneous models (39%). 48% of the respondents applied postprocessing steps.

Federated learning (FL) has been recognized as a privacy-preserving distributed machine learning paradigm that enables knowledge sharing among various heterogeneous artificial intelligence (AIoT) devices through centralized global model aggregation. FL suffers from model inaccuracy and slow convergence due to the model heterogeneity of the AIoT devices involved. Although various existing methods try to solve the bottleneck of the model heterogeneity problem, most of them improve the accuracy of heterogeneous models in a coarse-grained manner, which makes it still a great challenge to deploy large-scale AIoT devices. To alleviate the negative impact of this problem and take full advantage of the diversity of each heterogeneous model, we propose an efficient framework named HierarchyFL, which uses a small amount of public data for efficient and scalable knowledge across a variety of differently structured models. By using self-distillation and our proposed ensemble library, each hierarchical model can intelligently learn from each other on cloud servers. Experimental results on various well-known datasets show that HierarchyFL can not only maximize the knowledge sharing among various heterogeneous models in large-scale AIoT systems, but also greatly improve the model performance of each involved heterogeneous AIoT device.

Referring image segmentation aims at localizing all pixels of the visual objects described by a natural language sentence. Previous works learn to straightforwardly align the sentence embedding and pixel-level embedding for highlighting the referred objects, but ignore the semantic consistency of pixels within the same object, leading to incomplete masks and localization errors in predictions. To tackle this problem, we propose CoupAlign, a simple yet effective multi-level visual-semantic alignment method, to couple sentence-mask alignment with word-pixel alignment to enforce object mask constraint for achieving more accurate localization and segmentation. Specifically, the Word-Pixel Alignment (WPA) module performs early fusion of linguistic and pixel-level features in intermediate layers of the vision and language encoders. Based on the word-pixel aligned embedding, a set of mask proposals are generated to hypothesize possible objects. Then in the Sentence-Mask Alignment (SMA) module, the masks are weighted by the sentence embedding to localize the referred object, and finally projected back to aggregate the pixels for the target. To further enhance the learning of the two alignment modules, an auxiliary loss is designed to contrast the foreground and background pixels. By hierarchically aligning pixels and masks with linguistic features, our CoupAlign captures the pixel coherence at both visual and semantic levels, thus generating more accurate predictions. Extensive experiments on popular datasets (e.g., RefCOCO and G-Ref) show that our method achieves consistent improvements over state-of-the-art methods, e.g., about 2% oIoU increase on the validation and testing set of RefCOCO. Especially, CoupAlign has remarkable ability in distinguishing the target from multiple objects of the same class.

In this work, we propose MEDICO, a Multi-viEw Deep generative model for molecule generation, structural optimization, and the SARS-CoV-2 Inhibitor disCOvery. To the best of our knowledge, MEDICO is the first-of-this-kind graph generative model that can generate molecular graphs similar to the structure of targeted molecules, with a multi-view representation learning framework to sufficiently and adaptively learn comprehensive structural semantics from targeted molecular topology and geometry. We show that our MEDICO significantly outperforms the state-of-the-art methods in generating valid, unique, and novel molecules under benchmarking comparisons. In particular, we showcase the multi-view deep learning model enables us to generate not only the molecules structurally similar to the targeted molecules but also the molecules with desired chemical properties, demonstrating the strong capability of our model in exploring the chemical space deeply. Moreover, case study results on targeted molecule generation for the SARS-CoV-2 main protease (Mpro) show that by integrating molecule docking into our model as chemical priori, we successfully generate new small molecules with desired drug-like properties for the Mpro, potentially accelerating the de novo design of Covid-19 drugs. Further, we apply MEDICO to the structural optimization of three well-known Mpro inhibitors (N3, 11a, and GC376) and achieve ~88% improvement in their binding affinity to Mpro, demonstrating the application value of our model for the development of therapeutics for SARS-CoV-2 infection.

Stereo images, containing left and right view images with disparity, are utilized in solving low-vision tasks recently, e.g., rain removal and super-resolution. Stereo image restoration methods usually obtain better performance than monocular methods by learning the disparity between dual views either implicitly or explicitly. However, existing stereo rain removal methods still cannot make full use of the complementary information between two views, and we find it is because: 1) the rain streaks have more complex distributions in directions and densities, which severely damage the complementary information and pose greater challenges; 2) the disparity estimation is not accurate enough due to the imperfect fusion mechanism for the features between two views. To overcome such limitations, we propose a new \underline{Stereo} \underline{I}mage \underline{R}ain \underline{R}emoval method (StereoIRR) via sufficient interaction between two views, which incorporates: 1) a new Dual-view Mutual Attention (DMA) mechanism which generates mutual attention maps by taking left and right views as key information for each other to facilitate cross-view feature fusion; 2) a long-range and cross-view interaction, which is constructed with basic blocks and dual-view mutual attention, can alleviate the adverse effect of rain on complementary information to help the features of stereo images to get long-range and cross-view interaction and fusion. Notably, StereoIRR outperforms other related monocular and stereo image rain removal methods on several datasets. Our codes and datasets will be released.

The role of mobile cameras increased dramatically over the past few years, leading to more and more research in automatic image quality enhancement and RAW photo processing. In this Mobile AI challenge, the target was to develop an efficient end-to-end AI-based image signal processing (ISP) pipeline replacing the standard mobile ISPs that can run on modern smartphone GPUs using TensorFlow Lite. The participants were provided with a large-scale Fujifilm UltraISP dataset consisting of thousands of paired photos captured with a normal mobile camera sensor and a professional 102MP medium-format FujiFilm GFX100 camera. The runtime of the resulting models was evaluated on the Snapdragon's 8 Gen 1 GPU that provides excellent acceleration results for the majority of common deep learning ops. The proposed solutions are compatible with all recent mobile GPUs, being able to process Full HD photos in less than 20-50 milliseconds while achieving high fidelity results. A detailed description of all models developed in this challenge is provided in this paper.

Recently, discrete latent variable models have received a surge of interest in both Natural Language Processing (NLP) and Computer Vision (CV), attributed to their comparable performance to the continuous counterparts in representation learning, while being more interpretable in their predictions. In this paper, we develop a topic-informed discrete latent variable model for semantic textual similarity, which learns a shared latent space for sentence-pair representation via vector quantization. Compared with previous models limited to local semantic contexts, our model can explore richer semantic information via topic modeling. We further boost the performance of semantic similarity by injecting the quantized representation into a transformer-based language model with a well-designed semantic-driven attention mechanism. We demonstrate, through extensive experiments across various English language datasets, that our model is able to surpass several strong neural baselines in semantic textual similarity tasks.

The task of Compositional Zero-Shot Learning (CZSL) is to recognize images of novel state-object compositions that are absent during the training stage. Previous methods of learning compositional embedding have shown effectiveness in closed-world CZSL. However, in Open-World CZSL (OW-CZSL), their performance tends to degrade significantly due to the large cardinality of possible compositions. Some recent works separately predict simple primitives (i.e., states and objects) to reduce cardinality. However, they consider simple primitives as independent probability distributions, ignoring the heavy dependence between states, objects, and compositions. In this paper, we model the dependence of compositions via feasibility and contextuality. Feasibility-dependence refers to the unequal feasibility relations between simple primitives, e.g., \textit{hairy} is more feasible with \textit{cat} than with \textit{building} in the real world. Contextuality-dependence represents the contextual variance in images, e.g., \textit{cat} shows diverse appearances under the state of \textit{dry} and \textit{wet}. We design Semantic Attention (SA) and generative Knowledge Disentanglement (KD) to learn the dependence of feasibility and contextuality, respectively. SA captures semantics in compositions to alleviate impossible predictions, driven by the visual similarity between simple primitives. KD disentangles images into unbiased feature representations, easing contextual bias in predictions. Moreover, we complement the current compositional probability model with feasibility and contextuality in a compatible format. Finally, we conduct comprehensive experiments to analyze and validate the superior or competitive performance of our model, Semantic Attention and knowledge Disentanglement guided Simple Primitives (SAD-SP), on three widely-used benchmark OW-CZSL datasets.

Although scaling language models improves performance on a range of tasks, there are apparently some scenarios where scaling hurts performance. For instance, the Inverse Scaling Prize Round 1 identified four ''inverse scaling'' tasks, for which performance gets worse for larger models. These tasks were evaluated on models of up to 280B parameters, trained up to 500 zettaFLOPs of compute. This paper takes a closer look at these four tasks. We evaluate models of up to 540B parameters, trained on five times more compute than those evaluated in the Inverse Scaling Prize. With this increased range of model sizes and training compute, three out of the four tasks exhibit what we call ''U-shaped scaling'' -- performance decreases up to a certain model size, and then increases again up to the largest model evaluated. One hypothesis is that U-shaped scaling occurs when a task comprises a ''true task'' and a ''distractor task''. Medium-size models can do the distractor task, which hurts performance, while only large-enough models can ignore the distractor task and do the true task. The existence of U-shaped scaling implies that inverse scaling may not hold for larger models. Second, we evaluate the inverse scaling tasks using chain-of-thought (CoT) prompting, in addition to basic prompting without CoT. With CoT prompting, all four tasks show either U-shaped scaling or positive scaling, achieving perfect solve rates on two tasks and several sub-tasks. This suggests that the term "inverse scaling task" is under-specified -- a given task may be inverse scaling for one prompt but positive or U-shaped scaling for a different prompt.

Finetuning language models on a collection of datasets phrased as instructions has been shown to improve model performance and generalization to unseen tasks. In this paper we explore instruction finetuning with a particular focus on (1) scaling the number of tasks, (2) scaling the model size, and (3) finetuning on chain-of-thought data. We find that instruction finetuning with the above aspects dramatically improves performance on a variety of model classes (PaLM, T5, U-PaLM), prompting setups (zero-shot, few-shot, CoT), and evaluation benchmarks (MMLU, BBH, TyDiQA, MGSM, open-ended generation). For instance, Flan-PaLM 540B instruction-finetuned on 1.8K tasks outperforms PALM 540B by a large margin (+9.4% on average). Flan-PaLM 540B achieves state-of-the-art performance on several benchmarks, such as 75.2% on five-shot MMLU. We also publicly release Flan-T5 checkpoints, which achieve strong few-shot performance even compared to much larger models, such as PaLM 62B. Overall, instruction finetuning is a general method for improving the performance and usability of pretrained language models.